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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920193.1_cds_XP_016469378.1_61925
CDS Infomation

[gene=LOC107791757] [db_xref=GeneID:107791757] [protein=citrate synthase, mitochondrial] [protein_id=XP_016469378.1] [location=join(5571..5621,5718..5780,6720..6761,7101..7166,7252..7317,7430..7543,7929..7992,8193..8275,8945..8994,9071..9148,9343..9471,9606..9648,9839..9925,10835..10936,11484..11591,11691..11741,12233..12306,12394..12445,12546..12635)] [gbkey=CDS]
Sequence

ATGGTGTTCTATCGCGGCGTTTCTCTGCTGTCAAAGCTGCGTTCTCGAGCGGTCCAACAG
ACAAGTCTTAGCAATTCTGTGCGCTGGCTTCAAGTCCAAACCTCTTCTGGTCTTGATCTG
CGTTCTGAGCTGCAAGAATTGATTCCAGAACAACAGGATCGCCTGAAGAAGCTCAAGTCA
GAACATGGAAAGGTTCAATTGGGAAACATCACAATTGATATGGTTCTTGGTGGAATGAGA
GGAATGACAGGATTACTGTGGGAAACCTCATTACTTGACCCCGATGAGGGAATTCGCTTC
CGGGGCTTGTCTATACCTGAATGCCAAAAGGTATTACCCACAGCAAAGCCTGGGGGAGAG
CCCTTGCCTGAAGGTCTTCTCTGGCTTCTTTTAACAGGAAAGGTGCCATCAAAAGAGCAA
GTGGATTCATTGTCTCAGGAATTGCGAAGTCGTGCTACTGTCCCCGATCATGTATACAAA
ACTATTGATGCCTTACCAGTCACAGCTCACCCAATGACTCAGTTTACTACTGGAGTCATG
GCTCTTCAGGTTCAAAGTGAATTTCAGAAGGCATATGAGAAAGGGATTCACAAATCAAAG
TTATGGGAACCGACATATGAGGATTCCATGAGTTTGATTGCTCAAGTTCCACTTGTTGCT
GCTTATGTTTATCGCAGGATGTACAAGAACGGCAACACTATACCTAAGGATGAATCACTG
GATTATGGAGCAAATTTCGCTCACATGCTTGGTTTCAGTAGCTCTGACATGCATGAACTT
ATGAGGCTCTATGTCACGATACACAGTGATCATGAAGGTGGTAACGTCAGTGCTCACACA
GGCCACTTGGTTGCTAGTGCTTTGTCAGACCCTTACCTCTCCTTCGCTGCTGCTTTGAAT
GGTTTAGCTGGACCACTTCATGGTTTAGCCAATCAGGAAGTTTTGCTATGGATCAAATCT
GTTGTAGAGGAGTGTGGGGAGAACATTTCCAAAGAGCAGTTGAATGACTACGTCTGGAAA
ACATTGAAAAGTGGCAAGGTTGTCCCTGGTTTCGGACATGGAGTTCTGCGCAAGACTGAT
CCAAGATACACATGCCAGAGAGAGTTCGCTTTGAAGCATTTGCCTGAAGATCCACTGTTT
CAACTGGTTGCAAAACTCTACGAAGTTGTTCCTCCAATCCTTACAGAACTTGGCAAAGTT
AAAAACCCTTGGCCAAATGTTGATGCCCACAGTGGTGTGTTGTTGAACTATTATGGTTTA
ACTGAAGCAAGATATTATACGGTCCTCTTTGGTGTATCAAGAGCTCTTGGCATTTGCTCT
CAGCTAATTTGGGATCGAGCTCTTGGATTGCCACTAGAGAGGCCAAAGAGTGTCACAATG
GAGTGGCTTGAAAACCATTGCAAGAAAGCATGA

Peptide Sequence

PEP ID

XP_016469378.1
PEP Infomation

PREDICTED: citrate synthase, mitochondrial [Nicotiana tabacum]
Sequence

MVFYRGVSLLSKLRSRAVQQTSLSNSVRWLQVQTSSGLDLRSELQELIPEQQDRLKKLKS
EHGKVQLGNITIDMVLGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKVLPTAKPGGE
PLPEGLLWLLLTGKVPSKEQVDSLSQELRSRATVPDHVYKTIDALPVTAHPMTQFTTGVM
ALQVQSEFQKAYEKGIHKSKLWEPTYEDSMSLIAQVPLVAAYVYRRMYKNGNTIPKDESL
DYGANFAHMLGFSSSDMHELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALN
GLAGPLHGLANQEVLLWIKSVVEECGENISKEQLNDYVWKTLKSGKVVPGFGHGVLRKTD
PRYTCQREFALKHLPEDPLFQLVAKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYGL
TEARYYTVLFGVSRALGICSQLIWDRALGLPLERPKSVTMEWLENHCKKA

Transcript Sequence

Gene sequence data has not been registered.